High-Throughput Phenotyping Database

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Revision as of 19:49, 17 May 2016 by Mlucas (Talk | contribs) (Future HTP Database)

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The High-Throughput Phenotyping database consists of a set of platform-specific tables for each data collection platform: pheMU, phenocart and phenocam.

Each platform has an images table, an htp table and a run table.

  • The images table stores metadata about the images that were collected during each data collection run.
  • The htp table stores metadata about sensor measurements (observations) that were collected during each run.
  • The run table stores information about each data collection run such as date/time and geographical extent of the run.

Each set of platform-specific tables also relates to the plot_map table and the htp_instrument table.

  • The plot_map table contains information about the geographical coordinates of each plot associated with an experiment (field).
  • The htp_instrument table contains information about cameras and sensors used on each platform.

The diagram below illustrates the generalized set of HTP tables and their relationships.

HTP Database Tables.png

PheMU HTP Database

The core set of tables for the PheMU database are the phemu_images table, the phemu_htp table and the phemu_run table.

  • The phemu_images table stores metadata about the images that were collected during each data collection run.
  • The phemu_htp table stores metadata about sensor measurements (observations) that were collected during each run.
  • The phemu_run table stores information about each data collection run such as date/time and geographical extent of the run.

The core PheMU tables also relate to the plot_map table and the htp_instrument table.

  • The plot_map table contains information about the geographical coordinates of each plot associated with an experiment (field).
  • The htp_instrument table contains information about cameras and sensors used on each platform.

The diagram below illustrates the set of PheMU database tables and their relationships.


Phemu htp.png

Future HTP Database

The diagram below illustrates the set of future HTP database tables and their relationships.


HTP Database Schema Rev 4.png

HTP Database Table Structures

phemu_htp table